Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884922.1_cds_XP_016439004.1_34607
CDS Infomation

[gene=LOC107764939] [db_xref=GeneID:107764939] [protein=stomatal closure-related actin-binding protein 1] [protein_id=XP_016439004.1] [location=join(7581..7862,8090..8218,8796..8888,9799..9939,10505..10573,11652..11735,12121..12298,12636..12752,12897..12955,13768..13902,14265..14414,14505..14549)] [gbkey=CDS]
Sequence

ATGACAAGGGTAACTCGTGATTTTGGCGATACGATGCAAAGGGATGCTGTTCCTCCTGTA
TCAGCAGATGTGATCTTCCCTTCTAGCCGCTTTCCAAATTACAAAATAGGAGCTAACAAT
CAGATTGTGGAGGTGAAGGAGGATTCTACGGCTCTTACAATGAAAGAGGTGGTTGCTCGA
GAAACTGCCCAGTTACTAGAGCAGCAAAAACGACTCTCTGTTCGCGATCTAGCCAGTAAA
TTTGAAAAGGGTTTGGCTGCTGCCGCCAAGTTGTCTGATGAGGCAAGACTCAAAGATGCA
GCTTCACTGGAGAAGCATGTGCTGTTAAAGAAGCTCAGAGATGCACTTGAAGATTTGAGA
GGACGTGTGGCGGGGAAAAACAAGGATGATGTGGAGGAAGCTATTGCAATGGTTGAAGCT
TTAGCAGTACAATTAAGTCAGAGAGAAGGAGAGCTGATTCAGGAAAAGACCGAAGTTAAA
AAGCTTGCAACTTTTCTGAAGCAGGCTTCTGAAGATGCTAAGAAACTTGTTGAGGAAGAA
AGAGCTTATGCAAGGGCTGAAATTGAGAATGCAAGAGCAGCTGTTCAGAGAGTGGAAGAG
GCTCTTCAGGAGTATGAACGAATGTCCGGGGCCTCAGGAAAGCAGGACATGGAAGAATTG
ATGAAGGAAGTTCAAGAGGCAAGGCGAATCAAAATGCTACATCAGCCTAGTAAGGTCATG
GACATGGAGCATGAGCTTCAAGCATTACGAATGCAGCTTGCAGAGAAATCCAAGTATTCA
GTACAGCTTCAGAAAGAGCTGGCAAGGAAGATGGGTGAGGAAACTGTATCACAGTTATAT
GAATTAGATGGCACGGAAGCCCTGGGCTCGTTTTTGCAAATACAGCCCTGTTCTCTGGCT
GCTCCAGAACTTTCAGAATGTTCAATTCAGTGGTATCGCTTGGCTTGTGAAGGCGGGAAA
AAAGAACCTATTTCAGGGGCCACCAAACCGGTTTATGCTCCAGAACCATTTGACGTTGGA
CGAGTTTTGCAAGCCGAGATAACATTTGGAGACCAGACAACATTGATGACAACTGCTAGT
GCTATTGATCCAGCTGCAGGCTTGGGGAACTATGTTGAAGCTCTGGTGCGGAGGCATGAC
ATTGAATTCAATGTAGTTGTGGTCCAGATGAATGGAACGGATCATACATCAGAGAGTATC
CATGTATTACACATTGGAAGGATGAGAATGAAACTTCGTAAAGGGAAGACAAGTGTAGCA
AAAGAATACTATTCCGCTTCAATGCAGTTATGTGGAGTCAGAGGCGGGGGCAATGCTGCA
GCTCAGGCAACATTTTGGCAAGTAAAGACAGGGCTCTCCTTTGTATTAGCGTTTGAAACG
GAGAGAGAAAGAAATGCAGCTATTATGCTGGCCCGAAGGTTTGCCTATGACTGCAATATC
ATGCTAGCTGGACCGGATGATAGAGCAGCTCTTGGATCGTAA

Peptide Sequence

PEP ID

XP_016439004.1
PEP Infomation

PREDICTED: stomatal closure-related actin-binding protein 1 [Nicotiana tabacum]
Sequence

MTRVTRDFGDTMQRDAVPPVSADVIFPSSRFPNYKIGANNQIVEVKEDSTALTMKEVVAR
ETAQLLEQQKRLSVRDLASKFEKGLAAAAKLSDEARLKDAASLEKHVLLKKLRDALEDLR
GRVAGKNKDDVEEAIAMVEALAVQLSQREGELIQEKTEVKKLATFLKQASEDAKKLVEEE
RAYARAEIENARAAVQRVEEALQEYERMSGASGKQDMEELMKEVQEARRIKMLHQPSKVM
DMEHELQALRMQLAEKSKYSVQLQKELARKMGEETVSQLYELDGTEALGSFLQIQPCSLA
APELSECSIQWYRLACEGGKKEPISGATKPVYAPEPFDVGRVLQAEITFGDQTTLMTTAS
AIDPAAGLGNYVEALVRRHDIEFNVVVVQMNGTDHTSESIHVLHIGRMRMKLRKGKTSVA
KEYYSASMQLCGVRGGGNAAAQATFWQVKTGLSFVLAFETERERNAAIMLARRFAYDCNI
MLAGPDDRAALGS

Transcript Sequence

Gene sequence data has not been registered.